The detailed information of tRNA gene sequence


Sequence ID>C181109958
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 1621
End posion on genome 1693
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaattaatc
tRNA gene sequence 
GGGGCTATAGCTTAATTGGTAGAGCGCTTGTTTTGCAAGCAAGAAGTTAGCGGTTCAAGC
CCGCTTAGCTCCAatc
Downstream region at tRNA end position 
gcgcgcacac
Secondary structure (Cloverleaf model)
>C181109958	Ala	TGC
                   c      Aatc gcgcgcacac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C G
                    T     T C G C C     A
      T A A        A      | | | | |     A
    T       T T C G       A G C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AAGTT
                    C - G
                    T - A
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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