The detailed information of tRNA gene sequence


Sequence ID>C181109960
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 10357
End posion on genome 10430
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccaggttttT
tRNA gene sequence 
CGGAGCATGCTTGTAATGGTAGCATTTTTGGTTTGGGACCAAAAGATGAAAGTTCGAGTC
TTTCTGTTCCGAAgt
Downstream region at tRNA end position 
ttttgtgttt
Secondary structure (Cloverleaf model)
>C181109960	Pro	TGG
                   T      AAgt ttttgtgttt
                     C - G
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          T G
                    T     C T T T C     A
      A A T        G      | | | | |     G
    T       G T T C       G A A A G     C
    G           |                   T T
    G       G C A T
      T A          T     AGAT
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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