The detailed information of tRNA gene sequence


Sequence ID>C181109961
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 83736
End posion on genome 83807
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgcgttatgt
tRNA gene sequence 
GGCTTTATAGTATAATGGTAATTACGTGGGACTGCAAATCCTGTAATCTCAGTTCAAGTC
TGGGTAAAGCCTttg
Downstream region at tRNA end position 
tatactaata
Secondary structure (Cloverleaf model)
>C181109961	Cys	GCA
                   t      Tttg tatactaata
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A
                     A - T          T G
                    T     G G G T C     A
      T A A        A      | + | | |     A
    G       T A T G       C T C A G     C
    G         | | |                 T T
    T       T T A C
      A A          G     TAAT
                    T + G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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