The detailed information of tRNA gene sequence


Sequence ID>C181109964
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 98411
End posion on genome 98485
Amino Acid Sup
Anticodon TCA
Upstream region at tRNA start position 
agttaatttt
tRNA gene sequence 
tGGGGGTATAGCTTAGATGGTAAAGCAACGGTCTTCAAAACCGTAGATCACGGGTTCAAT
TCCTGTTGCCCTCGCCta
Downstream region at tRNA end position 
acgcaactgt
Secondary structure (Cloverleaf model)
>C181109964	Sup	TCA
                   t      CCta acgcaactgt
                     t + G
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     T G T C C     A
      A G A        A      | | + | |     A
    T       T T C G       A C G G G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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