The detailed information of tRNA gene sequence


Sequence ID>C181109965
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 123478
End posion on genome 123549
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaacagcct
tRNA gene sequence 
GGCGACATAGTTTATTTGGTAAAACAGAAGGCTCATAATCTTCAAAACAGGGTTCAATCC
CCTGTGCCGCTTaca
Downstream region at tRNA end position 
caaactacga
Secondary structure (Cloverleaf model)
>C181109965	Met	CAT
                   t      Taca caaactacga
                     G + T
                     G - C
                     C - G
                     G - C
                     A   C
                     C - G
                     A - T          C T
                    T     G T C C C     A
      T T A        A      | | | | |     A
    T       T T T G       C A G G G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     AAAA
                    G - C
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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