The detailed information of tRNA gene sequence


Sequence ID>C181109967
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 132174
End posion on genome 132247
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgcgggttcg
tRNA gene sequence 
GGGTGATTAACTCAGCGGTTAGAGTGTCTCGTTTACACCGAGAAAGGCGAAGGTTCAAAT
CCTTCATTACCCACgc
Downstream region at tRNA end position 
gactagtggg
Secondary structure (Cloverleaf model)
>C181109967	Val	TAC
                   g      ACgc gactagtggg
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     A - T
                     T - A          T A
                    T     C T T C C     A
      C G A        A      | | | | |     A
    G       C T C A       G A A G G     C
    G       | | | |                 T T
    T       G A G T
      T A          G     AAGGC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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