The detailed information of tRNA gene sequence


Sequence ID>C181109970
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 132319
End posion on genome 132247
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttgccaga
tRNA gene sequence 
GCGGCTATAACTCAGCGGTTAGAGTGTAAGCTTGTCAAGCTTAAAGTCATGGGTTCAAAT
CCCACTAGTCGCGtgg
Downstream region at tRNA end position 
gtaatgaagg
Secondary structure (Cloverleaf model)
>C181109970	Asp	GTC
                   a      Gtgg gtaatgaagg
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     T - A
                     A - T          T A
                    T     C A C C C     A
      C G A        A        | | | |     A
    G       C T C A       A T G G G     C
    G       | | | |                 T T
    T       G A G T
      T A          G     AAGTC
                    T - A
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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