The detailed information of tRNA gene sequence


Sequence ID>C181109972
Genome IDCP024987
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola CHOCRA [CP024987]
Start position on genome 122577
End posion on genome 122505
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgtacttca
tRNA gene sequence 
GGACTTATAGCTTAAAGGCAAAGCAGGTGGCTCATGACCATTATATTGGGGGTTCGACTC
CCTCTAAGTCTACat
Downstream region at tRNA end position 
tttaattaaa
Secondary structure (Cloverleaf model)
>C181109972	Met	CAT
                   a      ACat tttaattaaa
                     G + T
                     G - C
                     A - T
                     C - G
                     T - A
                     T - A
                     A - T          T C
                    T     C T C C C     A
        A A        A      | + | | |     G
      A     T T C G       G G G G G     C
      G     | | | |                 T T
      G     A A G C
        C A        A     ATATT
                    G + T
                    G + T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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