The detailed information of tRNA gene sequence


Sequence ID>C181111764
Genome IDCP025044
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile R0104a [CP025044]
Start position on genome 4117654
End posion on genome 4117728
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accaaaatgt
tRNA gene sequence 
GGCGGTATAGCTTAGTTGGCTAGAGCGTTCGGTTCATACCCGAAAGGTCATAGGTTCGAC
TCCTATTACCGCTACta
Downstream region at tRNA end position 
aaatttaatg
Secondary structure (Cloverleaf model)
>C181111764	Met	CAT
                   t      ACta aaatttaatg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       T T C G       A T A G G     C
    G       + | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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