The detailed information of tRNA gene sequence


Sequence ID>C181115889
Genome IDCP025312
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETCHI1b [CP025312]
Start position on genome 33655
End posion on genome 33584
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtagcgttat
tRNA gene sequence 
GGTTTTGTAGTATAATGGTAATTACATGGGACTGCAAATCCTGTAATCTCAGTTCAAGTC
TGAGCGAAGCCTttg
Downstream region at tRNA end position 
tatactaata
Secondary structure (Cloverleaf model)
>C181115889	Cys	GCA
                   t      Tttg tatactaata
                     G - C
                     G - C
                     T + G
                     T - A
                     T - A
                     T + G
                     G - C          T G
                    T     G A G T C     A
      T A A        A      | | | | |     A
    G       T A T G       C T C A G     C
    G         | | |                 T T
    T       T T A C
      A A          A     TAAT
                    T + G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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