The detailed information of tRNA gene sequence


Sequence ID>C181115895
Genome IDCP025313
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETCHI1a [CP025313]
Start position on genome 105739
End posion on genome 105809
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttaaattc
tRNA gene sequence 
GGCGGCATAGTTAATTGGCAAAACGGAAGGCTCATAATCTTCAAAACAGGGTTCGATTCC
CTGTGGCGCCAgcg
Downstream region at tRNA end position 
caaactgcga
Secondary structure (Cloverleaf model)
>C181115895	Met	CAT
                   c      Agcg caaactgcga
                     G - C
                     G - C
                     C - G
                     G - C
                     G   G
                     C - G
                     A - T          T T
                    T     G T C C C     A
        T A        A      | | | | |     G
      T     A T T G       C A G G G     C
      G       | | |                 T T
      G     A A A C
        C A        G     AAAA
                    G - C
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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