The detailed information of tRNA gene sequence


Sequence ID>C181115901
Genome IDCP025313
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETCHI1a [CP025313]
Start position on genome 104827
End posion on genome 104756
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgccgcacc
tRNA gene sequence 
GGACTTATAGCTTAAAGGTAAAGCAGATGGCTCATGACCATTTCATTGGGGGTTCGAGTC
CCTCTGGGTCTAaat
Downstream region at tRNA end position 
acgtctaaat
Secondary structure (Cloverleaf model)
>C181115901	Met	CAT
                   c      Aaat acgtctaaat
                     G + T
                     G - C
                     A - T
                     C - G
                     T + G
                     T + G
                     A - T          T G
                    T     C T C C C     A
        A A        A      | + | | |     G
      A     T T C G       G G G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        A     TCATT
                    G + T
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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