The detailed information of tRNA gene sequence


Sequence ID>C181115905
Genome IDCP025316
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETAUR1a [CP025316]
Start position on genome 4556
End posion on genome 4630
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggtttaaaT
tRNA gene sequence 
TACGGGATGGAGTAGAGGTATCTCGTTAGGCTCATAACCTAAAGGTCGCAGGTTCGAATC
CTGCTCCCGTTGGCt
Downstream region at tRNA end position 
attggatcac
Secondary structure (Cloverleaf model)
>C181115905	Met	CAT
                   T      GGCt attggatcac
                     T   T
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
        G A        G      | | | | |     G
      A     T G A G       G C A G G     C
      G       | | |                 T T
      G     T C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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