The detailed information of tRNA gene sequence


Sequence ID>C181115915
Genome IDCP025316
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETAUR1a [CP025316]
Start position on genome 34625
End posion on genome 34554
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtagcgttat
tRNA gene sequence 
GGTTTTGTAGTATAATGGTAATTACATGGGACTGCAAATCCTGTAATCTCAGTTCAAGCC
TGAGCGAAGCCTttg
Downstream region at tRNA end position 
tatactaaca
Secondary structure (Cloverleaf model)
>C181115915	Cys	GCA
                   t      Tttg tatactaaca
                     G - C
                     G - C
                     T + G
                     T - A
                     T - A
                     T + G
                     G - C          C G
                    T     G A G T C     A
      T A A        A      | | | | |     A
    G       T A T G       C T C A G     C
    G         | | |                 T T
    T       T T A C
      A A          A     TAAT
                    T + G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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