The detailed information of tRNA gene sequence


Sequence ID>C181116675
Genome IDCP025404
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLON2b [CP025404]
Start position on genome 1580
End posion on genome 1652
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atattaaaac
tRNA gene sequence 
GGGGCTATAACTTAATTGGCAGAGTGTTTGTTTTGCAAGCAAAACGTTAGCGGTTCAAAT
CCGCTTGGCTCCAatt
Downstream region at tRNA end position 
tttgtgtgct
Secondary structure (Cloverleaf model)
>C181116675	Ala	TGC
                   c      Aatt tttgtgtgct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     A - T          T A
                    T     T C G C C     A
      T A A        A      | | | | |     A
    T       T T C A       A G C G G     C
    G       + | | |                 T T
    G       G A G T
      C A          G     ACGTT
                    T - A
                    T - A
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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