The detailed information of tRNA gene sequence


Sequence ID>C181116679
Genome IDCP025404
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLON2b [CP025404]
Start position on genome 89688
End posion on genome 89761
Amino Acid Sup
Anticodon TCA
Upstream region at tRNA start position 
gtcgcttgct
tRNA gene sequence 
tGAGGGTATAGCTTAGGCGGTAAGGCAACGGCCTTCAAAACCGTAGATATAGGTTCAATT
CCTATTGTCCTCGCCtg
Downstream region at tRNA end position 
cctttagttt
Secondary structure (Cloverleaf model)
>C181116679	Sup	TCA
                   t      CCtg cctttagttt
                     t + G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     T + G
                     A - T          T T
                    T     T A T C C     A
      G G A        A      | | | | |     A
    C       T T C G       A T A G G     C
    G       | + | |                 T T
    G       A G G C
      T A          A     AGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    C   A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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