The detailed information of tRNA gene sequence


Sequence ID>C181116697
Genome IDCP025405
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLON2a [CP025405]
Start position on genome 124743
End posion on genome 124816
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tatcttaatT
tRNA gene sequence 
GGGTGATTAACTCAGCGGCAGAGTGTTTCGTTTACACCGAGAGAGACGAAGGTTCGAATC
CTTCATTACCCAAtc
Downstream region at tRNA end position 
gggcgcgcgg
Secondary structure (Cloverleaf model)
>C181116697	Val	TAC
                   T      AAtc gggcgcgcgg
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     A - T
                     T - A          T A
                    T     C T T C C     A
        G A        A      | | | | |     G
      C     C T C A       G A A G G     C
      G     | | | |                 T T
      G     G A G T
        C A        G     GAGAC
                    T - A
                    T + G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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