The detailed information of tRNA gene sequence


Sequence ID>C181116700
Genome IDCP025405
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLON2a [CP025405]
Start position on genome 124896
End posion on genome 124823
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgttaacaa
tRNA gene sequence 
GCGGCTGTGACTCAGCGGTTAGAGTGTAAGCGTGTCAAGCTTAAGGCCACGGGTTCAAAT
CCCGTTAGCCGCGCgc
Downstream region at tRNA end position 
ccgattgggt
Secondary structure (Cloverleaf model)
>C181116700	Asp	GTC
                   a      GCgc ccgattgggt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G + T          T A
                    T     T G C C C     A
      C G A        G      | | | | |     A
    G       C T C A       A C G G G     C
    G       | | | |                 T T
    T       G A G T
      T A          G     AGGCC
                    T - A
                    A - T
                    A - T
                    G - C
                    C - G
                  G       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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