The detailed information of tRNA gene sequence


Sequence ID>C181127895
Genome IDCP026101
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia caribensis DSM 13236 [CP026101, CP026102, CP026103, CP026104]
Start position on genome 2317623
End posion on genome 2317533
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctccccgcc
tRNA gene sequence 
GGAGAGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTATAGGTTAATAACCT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
aaagattgcc
Secondary structure (Cloverleaf model)
>C181127895	Ser	GGA
                   c      GCCA aaagattgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G T A G       C G G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TATAGGTTAATAACCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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