The detailed information of tRNA gene sequence


Sequence ID>W09107520
Genome IDABJA01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPolynucleobacter necessarius STIR1 [ABJA]
Start position on genome 45375
End posion on genome 45300
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atcaaccgtt
tRNA gene sequence 
GCCCCTTTAGCTCATCTGGTAGAGCAACTGATTTGTAATCAGTAGGTGGTCTGTTCGAGT
CGGACAAGGGGCACCA
Downstream region at tRNA end position 
ccaattttct
Secondary structure (Cloverleaf model)
>W09107520	Thr	TGT
                   t      ACCA ccaattttct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C A G G C     A
      C T A        A      | | | + |     G
    T       C T C G       G T C T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTG
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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