The detailed information of tRNA gene sequence


Sequence ID>C181128025
Genome IDCP026111
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia terrae DSM 17804 [CP026111, CP026112, CP026113, CP026114]
Start position on genome 2321895
End posion on genome 2321805
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctccccgcc
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTATAGGTTAATAACCT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
caattcaata
Secondary structure (Cloverleaf model)
>C181128025	Ser	GGA
                   c      GCCA caattcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        G      | | | | |     G
    G       G T A G       C G G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TATAGGTTAATAACCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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