The detailed information of tRNA gene sequence


Sequence ID>C181136856
Genome IDCP026647
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 biovar El Tor HC1037 [CP026647, CP026648]
Start position on genome 2576731
End posion on genome 2576807
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaacatagt
tRNA gene sequence 
CGGTGAATAGCGCAGTTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGGGTTCGAA
TCCCTCTTCACCGACCA
Downstream region at tRNA end position 
ctcttcaaag
Secondary structure (Cloverleaf model)
>C181136856	Pro	TGG
                   t      ACCA ctcttcaaag
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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