The detailed information of tRNA gene sequence


Sequence ID>C181143794
Genome IDCP026924
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAgrobacterium tumefaciens 1D1609 [CP026924, CP026925]
Start position on genome 127839
End posion on genome 127750
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttgaaaaa
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTGCGTGAAAGCGTA
CCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
tttcacccca
Secondary structure (Cloverleaf model)
>C181143794	Ser	GGA
                   a      GCCA tttcacccca
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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