The detailed information of tRNA gene sequence


Sequence ID>C181158403
Genome IDCP027666
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesOttowia oryzae KADR8-3 [CP027666]
Start position on genome 1188770
End posion on genome 1188858
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtttttttt
tRNA gene sequence 
GGAGCGTTGGCCGAGCGGCCCAAGGTAACGGCTTGCTAAGCCGTGGTCGCGCCAGCGGCC
CGCTGGTTCGAATCCAGCACGCTCCGCCA
Downstream region at tRNA end position 
tttttctctg
Secondary structure (Cloverleaf model)
>C181158403	Ser	GCT
                   t      GCCA tttttctctg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C G A C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | +                 T T
    C       A G G T
      C C A        A     GGTCGCGCCAGCGGCCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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