The detailed information of tRNA gene sequence


Sequence ID>C181158422
Genome IDCP027666
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesOttowia oryzae KADR8-3 [CP027666]
Start position on genome 2877289
End posion on genome 2877384
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttctcaattc
tRNA gene sequence 
GGAAGGGCAACCATCCTGGTGGGTGGGCCGGGCTTCAAACCCGGTGGGTGACGCCATGCG
TCGCCGGGTGGGTTCGACTCCCATGCCCTTCCGCCA
Downstream region at tRNA end position 
aacagccttg
Secondary structure (Cloverleaf model)
>C181158422	SeC	TCA
                   c      GCCA aacagccttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T C
                    A     T A C C C     A
      T C C        A      + | | | |     G
    G       T A C C       G T G G G     C
    G       + | | |                 T T
    T       G T G G
      G G          G     TGGGTGACGCCATGCGTCGCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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