The detailed information of tRNA gene sequence


Sequence ID>C181159382
Genome IDCP027773
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PMC12 [CP027773, CP027774]
Start position on genome 5148014
End posion on genome 5148090
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtggcgcgt
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCGAGTGTTCAAG
CCACTCACGGCCTACCA
Downstream region at tRNA end position 
ccatcccccg
Secondary structure (Cloverleaf model)
>C181159382	Met	CAT
                   t      ACCA ccatcccccg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C G
                    T     C T C A C     A
      T G A        A      | | | | |     A
    T       C T C G       G A G T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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