The detailed information of tRNA gene sequence


Sequence ID>C181159386
Genome IDCP027773
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PMC12 [CP027773, CP027774]
Start position on genome 5447462
End posion on genome 5447551
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgacagcacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACTAGCGATAGTA
CCGAGGGTTCGAATCCCTCCCTCTCCTCCA
Downstream region at tRNA end position 
agaatggccc
Secondary structure (Cloverleaf model)
>C181159386	Ser	CGA
                   c      TCCA agaatggccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTACTAGCGATAGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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