The detailed information of tRNA gene sequence


Sequence ID>C181159414
Genome IDCP027773
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PMC12 [CP027773, CP027774]
Start position on genome 1174218
End posion on genome 1174143
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcgctgccgG
tRNA gene sequence 
AGAGCGGTGGTGTAGCGGAAGCACATCCTCCTTGCAGGAGGGGAGCGCTGGTTCAAATCC
AGCTCGTTTTCCCC
Downstream region at tRNA end position 
Acgcggattc
Secondary structure (Cloverleaf model)
>C181159414	Ala	TGC
                   G      CCCC Acgcggattc
                     A - T
                     G + T
                     A - T
                     G + T
                     C - G
                     G - C
                     G + T          T A
                    T     C G A C C     A
        G A        G      | | | | |     A
      C     T G T G       G C T G G     C
      G     + | | |                 T T
      G     G C A C
        A A        A     GAGC
                    T + G
                    C - G
                    C - G
                    T - A
                    C - G
                  C       G
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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