The detailed information of tRNA gene sequence


Sequence ID>C181171011
Genome IDCP028968
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAminobacter sp. MSH1 [CP028968]
Start position on genome 2342360
End posion on genome 2342284
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctccaccct
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGTGGTTCGAG
TCCACTTCCCGCTACCA
Downstream region at tRNA end position 
tttcccctcc
Secondary structure (Cloverleaf model)
>C181171011	Met	CAT
                   t      ACCA tttcccctcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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