The detailed information of tRNA gene sequence


Sequence ID>C181175838
Genome IDCP029185
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesLimnobaculum parvum HYN0051 [CP029185]
Start position on genome 2048283
End posion on genome 2048370
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacaaaattt
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tattttaaga
Secondary structure (Cloverleaf model)
>C181175838	Ser	GGA
                   t      GCCA tattttaaga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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