The detailed information of tRNA gene sequence


Sequence ID>C181175944
Genome IDCP029187
Search identical group
Phylum/ClassBacteroidota
SpeciesFlavobacterium pallidum HYN0049 [CP029187]
Start position on genome 2698939
End posion on genome 2699023
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaaaaaca
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCGACGTGCAAACGTCGCC
AGGGTTCGAGTCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
gtttttttcg
Secondary structure (Cloverleaf model)
>C181175944	Ser	GCT
                   a      GCtt gtttttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G G C C       C A G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CGACGTGCAAACGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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