The detailed information of tRNA gene sequence


Sequence ID>C181175961
Genome IDCP029187
Search identical group
Phylum/ClassBacteroidota
SpeciesFlavobacterium pallidum HYN0049 [CP029187]
Start position on genome 546645
End posion on genome 546558
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcaaactt
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCAAGCCTGGAAAGTTTGTATGTGGGCAACTGCA
TCGTGGGTTCGAATCCCATCCTCTCTGCat
Downstream region at tRNA end position 
tgaaatgcgc
Secondary structure (Cloverleaf model)
>C181175961	Ser	GGA
                   t      GCat tgaaatgcgc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGTGGGCAACTGCATC
                    C - G
                    A - T
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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