The detailed information of tRNA gene sequence


Sequence ID>C181187279
Genome IDCP030032
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesBradymonas sediminis FA350 [CP030032]
Start position on genome 2486057
End posion on genome 2485968
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtttgattc
tRNA gene sequence 
GGGGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGTTTATCCCG
TATCGAGGGTTCGAATCCCTCCCTCTCCGCtg
Downstream region at tRNA end position 
gacgaagttg
Secondary structure (Cloverleaf model)
>C181187279	Ser	GCT
                   c      GCtg gacgaagttg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGTTTATCCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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