The detailed information of tRNA gene sequence


Sequence ID>C181188756
Genome IDCP030158
Search identical group
Phylum/ClassRhodothermota
SpeciesRoseithermus sacchariphilus MEBiC09517 [CP030158]
Start position on genome 1740108
End posion on genome 1740183
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tccagcaaac
tRNA gene sequence 
GGGTCCTTAGCTCAGCGGTTTAGAGCGCTCGCCTCACACGCGAGAGGTCACTGGTTCAAA
TCCAGTAGGACCCACCc
Downstream region at tRNA end position 
gacgagcccg
Secondary structure (Cloverleaf model)
>C181188756	Val	CAC
                   c      ACCc gacgagcccg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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