The detailed information of tRNA gene sequence


Sequence ID>C181188787
Genome IDCP030158
Search identical group
Phylum/ClassRhodothermota
SpeciesRoseithermus sacchariphilus MEBiC09517 [CP030158]
Start position on genome 1166131
End posion on genome 1166055
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
acgtcgttcc
tRNA gene sequence 
GGGCGGTTAGCTCAGCCGGTTCAGAGCACCTGCCTTACAAGCAGGGGGTCACTGGTTCGA
ATCCAGTACCGCCCACCt
Downstream region at tRNA end position 
cccttccccc
Secondary structure (Cloverleaf model)
>C181188787	Val	TAC
                   c      ACCt cccttccccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G A C C     A
    C C G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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