The detailed information of tRNA gene sequence


Sequence ID>C181188791
Genome IDCP030158
Search identical group
Phylum/ClassRhodothermota
SpeciesRoseithermus sacchariphilus MEBiC09517 [CP030158]
Start position on genome 537928
End posion on genome 537838
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggcagcga
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGGCAAAACCC
GTATCGAGGGTTCGAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
ccccttacct
Secondary structure (Cloverleaf model)
>C181188791	Ser	GCT
                   a      GCaa ccccttacct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGCAAAACCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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