The detailed information of tRNA gene sequence


Sequence ID>C181191184
Genome IDCP030277
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodobiaceae bacterium SMS8 [CP030277]
Start position on genome 1307458
End posion on genome 1307368
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acacggcggt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcccccg
Secondary structure (Cloverleaf model)
>C181191184	Ser	GCT
                   t      GCCA ttttcccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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