The detailed information of tRNA gene sequence


Sequence ID>C181192094
Genome IDCP030716
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber P13 [CP030716]
Start position on genome 1379477
End posion on genome 1379552
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gcttaagatg
tRNA gene sequence 
GTGGGTGTAGCTCAGTCGGTTAGAGCGCTAGGTTGTGGTCCTAGAGGCCGTGGGTTCAAA
TCCCACCACTCACCCCg
Downstream region at tRNA end position 
cctgcgatcc
Secondary structure (Cloverleaf model)
>C181192094	His	GTG
                   g      CCCg cctgcgatcc
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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