The detailed information of tRNA gene sequence


Sequence ID>C181192099
Genome IDCP030716
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber P13 [CP030716]
Start position on genome 1859105
End posion on genome 1859181
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aattcccaat
tRNA gene sequence 
AGGCTCGTAGCTCAACCTGGTAGAGCAACGGACTCTTAATCCGTGAGCTGGGGGTTCGAA
TCCCCCCGGGCCTACCA
Downstream region at tRNA end position 
ccacccgcgc
Secondary structure (Cloverleaf model)
>C181192099	Lys	CTT
                   t      ACCA ccacccgcgc
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C A A        A      | | | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GAGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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