The detailed information of tRNA gene sequence


Sequence ID>C181195686
Genome IDCP031112
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis UK38 [CP031112]
Start position on genome 2960155
End posion on genome 2960231
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgcgatcctt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCGAGTTCGAA
TCCCGCCGCCCCGACCA
Downstream region at tRNA end position 
atatccatgc
Secondary structure (Cloverleaf model)
>C181195686	Pro	TGG
                   t      ACCA atatccatgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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