The detailed information of tRNA gene sequence


Sequence ID>C181200828
Genome IDCP031458
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzae JL28 [CP031458]
Start position on genome 2140420
End posion on genome 2140345
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcagtttcgt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCGGCGGTTCGATC
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
ctccagacat
Secondary structure (Cloverleaf model)
>C181200828	Ala	GGC
                   t      ACCA ctccagacat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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