The detailed information of tRNA gene sequence


Sequence ID>C181202078
Genome IDCP031555
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira indica PB8BT [CP031555]
Start position on genome 2323088
End posion on genome 2323164
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccacccagc
tRNA gene sequence 
GGTCCCTTAGCTCAACTGGATAGAGCAACAGACTTCTAATCTGTAGGTTGCAGGTTCGAG
TCCTGCAGGGATCGCCA
Downstream region at tRNA end position 
tttttattct
Secondary structure (Cloverleaf model)
>C181202078	Arg	TCT
                   c      GCCA tttttattct
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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