The detailed information of tRNA gene sequence


Sequence ID>C181202104
Genome IDCP031555
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira indica PB8BT [CP031555]
Start position on genome 2599840
End posion on genome 2599751
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccagttttgc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCAGCGGTCTTGAAAACCGCCGTGCCTTTACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttactccaa
Secondary structure (Cloverleaf model)
>C181202104	Ser	TGA
                   c      GCCA tttactccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGTGCCTTTACGGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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