The detailed information of tRNA gene sequence


Sequence ID>C181203523
Genome IDLN890655
Search identical group
Phylum/ClassChloroflexota
SpeciesCandidatus Promineifilum breve Cfx-K [LN890655, LN890656]
Start position on genome 3848793
End posion on genome 3848697
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aattcctgat
tRNA gene sequence 
GGGAGTGGTTGTGTCCCGGTGGATGCCCTTGTCTTCAAAATAAGTGGCCGGCTACGCACA
GTAGGCGGTGGTGGGTTCGACTCCCATCCGCTCCCGCta
Downstream region at tRNA end position 
atccgctatc
Secondary structure (Cloverleaf model)
>C181203523	SeC	TCA
                   t      GCta atccgctatc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G T G       G T G G G     C
    G       | + + |                 T T
    T       A T G C
      G G          C     TGGCCGGCTACGCACAGTAGGCGGTG
                    C - G
                    T - A
                    T - A
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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