The detailed information of tRNA gene sequence


Sequence ID>C181203904
Genome IDLS398547
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398547]
Start position on genome 1263341
End posion on genome 1263265
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tatattaata
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCATTACGTTGACGTCGTAAGGGTCAGTGGTTCGAA
TCCTCTATCGCCCACCA
Downstream region at tRNA end position 
accaaaaagc
Secondary structure (Cloverleaf model)
>C181203904	Val	GAC
                   a      ACCA accaaaaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      T G A        A      | |   | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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