The detailed information of tRNA gene sequence


Sequence ID>C181203911
Genome IDLS398547
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398547]
Start position on genome 341904
End posion on genome 341829
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attattttat
tRNA gene sequence 
CGGAGCATGGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGCCGGGAGTTCAAA
TCTCTCTGCTCCGACCg
Downstream region at tRNA end position 
ttattatatt
Secondary structure (Cloverleaf model)
>C181203911	Pro	TGG
                   t      ACCg ttattatatt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | + | | |     A
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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