The detailed information of tRNA gene sequence


Sequence ID>C181203924
Genome IDLS398548
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398548]
Start position on genome 1042260
End posion on genome 1042337
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttatataata
tRNA gene sequence 
GGGGGCATAGCTCAGCTTGGTTAGAGCGTCGGCCTGTCAAGCCGAAGGCCGCGGGTTCAA
GTCCCGTTGCTCCCGCCA
Downstream region at tRNA end position 
ttctgttata
Secondary structure (Cloverleaf model)
>C181203924	Asp	GTC
                   a      GCCA ttctgttata
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T          T G
                    T     T G C C C     A
    T C G A        A      + | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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