The detailed information of tRNA gene sequence


Sequence ID>C181203959
Genome IDLS398549
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398549]
Start position on genome 2087111
End posion on genome 2087037
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttatttagtt
tRNA gene sequence 
AGGAGTGTAGCTCAATGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCAAGTC
CTGTCTCTCCTGCCA
Downstream region at tRNA end position 
cttctatata
Secondary structure (Cloverleaf model)
>C181203959	Trp	CCA
                   t      GCCA cttctatata
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T   T
                     G - C          T G
                    T     T G T C C     A
        A A        A      + | + | |     A
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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