The detailed information of tRNA gene sequence


Sequence ID>C181203962
Genome IDLS398549
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398549]
Start position on genome 1978639
End posion on genome 1978565
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaattcagt
tRNA gene sequence 
GGGGATGTAGCTCAGTGGCAGAGCGTCTGTCTTGCACGCAGAAAGTCGGGGGTTCAATTC
CCTTCATCTCCACCA
Downstream region at tRNA end position 
tgttaccatc
Secondary structure (Cloverleaf model)
>C181203962	Ala	TGC
                   t      ACCA tgttaccatc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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