The detailed information of tRNA gene sequence


Sequence ID>C181203971
Genome IDLS398549
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398549]
Start position on genome 484338
End posion on genome 484262
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttaaaattaa
tRNA gene sequence 
GCACTCGTAGCTTAACTGGATAGAGTATTGCCCTCCGAAGGCAAAGGTTGTTGGTTCAAA
TCCAATCGGGTGCACCA
Downstream region at tRNA end position 
aaaaagtgtt
Secondary structure (Cloverleaf model)
>C181203971	Arg	CCG
                   a      ACCA aaaaagtgtt
                     G - C
                     C - G
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T A A C C     A
      C A A        A      + | | | |     A
    T       T T C G       G T T G G     C
    G       + | | +                 T T
    G       G A G T
      A T A        A     AGGTT
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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